PJS v148 Special

Philippine Journal of Science
Special Issue on Genomics


About the Cover

About This Special Issue
Caesar A. Saloma

Raul V. Destura


Cytochrome C Oxidase Subunit 1 (COI) Profile of the Philippine Helicostylinae (Gastropoda: Stylommatophora: Camaenidae)
Gizelle A. Batomalaque, Gerard Clinton L. Que, Tyrill Adolf B. Itong, Anna Regina L. Masanga, Emmanuel Ryan C. de Chavez, and Ian Kendrich C. Fontanilla

Creating a Roadmap for Building a Sustainable Genomics Facility in the Philippines
Alexander T. Young

Transcriptome Analysis of Milkfish after Exposure to Aeromonas hydrophila using Next-generation Sequencing
Jaime Lorenzo N. Dinglasan, Lorenz Rhuel P. Ragasa, Anacleto M. Argayosa, Zubaida U. Basiao, and Michael C. Velarde

Filipino DNA Variation at 36 Y-chromosome Short Tandem Repeat (STR) Marker Units
Jazelyn M. Salvador, Jae Joseph Russell B. Rodriguez, Lindsay Clare D.L. Carandang, Altair B. Agmata, Maria Lourdes D. Honrado, Frederick C. Delfin, and Maria Corazon A. De Ungria

Metagenomic Analysis Reveals the Prevalence of Heavy Metal Response Genes from Cyanobacteria Thriving in Balatoc Mines, Benguet Province, Philippines
Libertine Rose S. Sanchez and Ernelea P. Cao

Differential Expression Analysis in High-yielding and Low-yielding Philippine Coconut through Transcriptome Sequencing
Ma. Regina Punzalan, Gamaliel Lysander Cabria, Ma. Anita Bautista, Ernesto Emmanuel, Ramon Rivera, Susan Rivera, and Cynthia Saloma

Genetic Diversity Analysis of Selected Sugarcane (Saccharum spp. Hybrids) Varieties Using DArT-seq Technology
Erin B. Bello, Jhun Laurence S. Rasco, Pamella Marie D. Sendon, Fe M. Dela Cueva, Antonio G. Lalusin, and Antonio C. Laurena

Draft Genome Sequences of Ralstonia solanacearum Isolated from Banana and Tomato in the Philippines
Ma. Anita M. Bautista, Jo-Hannah S. Llames, Emilia Andrea V. Sabban, and Lucille C. Villegas

DNA Barcodes Reveal High Genetic Diversity in Philippine Fruit Bats
Adrian U. Luczon, Sofia Anne Marie M. Ampo, John Gregor A. Roño, Mariano Roy M. Duya, Perry S. Ong, and Ian Kendrich C. Fontanilla

Transcriptome of the Traditional Coconut Variety Laguna Tall
Ma. Regina Punzalan, Ma. Anita Bautista, Ernesto Emmanuel, Ramon Rivera, Susan Rivera, and Cynthia Saloma

Complete Mitochondrial Genome and Novel Gene Organization of Ryssota otaheitana (Pulmonata: Chronidae), and its Implications on the Stylommatophora Phylogeny
Amor M. Damatac II and Ian Kendrich C. Fontanilla

Genome-guided Molecular Characterization of Oil Genes in Coconut (Cocos nucifera L.)
Anand Noel C. Manohar, Darlon V. Lantican, Melvin P. Dancel, Don Emanuel M. Cardona, Alissa Carol M. Ibarra, Cynthia R. Gulay, Alma O. Canama, Roanne R. Gardoce, and Hayde F. Galvez

Characterization of the Biosynthetic Potential of the β-proteobacterium Achromobacter xylosoxidans Strain ISP2-142-O-2-A Using Microbiological, Chemical, and Genomic Approaches
Miguel Azcuna, Lilibeth Salvador-Reyes, Jortan Tun, Arturo Lluisma, Iris Diana Uy, Lovette Cunanan, Maria Auxilia Siringan, and Gisela P. Concepcion

Genome-wide Analysis for Variants in Philippine Trypanosoma evansi Isolates with Varying Drug Resistance Profiles
Jose Enrico H. Lazaro, Neil Andrew D. Bascos, Francis A. Tablizo, Nancy S. Abes, Renlyn Ivy DG. Paynaganan, Michelle A. Miguel, Hector M. Espiritu, Mary Rose D. Uy, Claro N. Mingala, and Cynthia P. Saloma

Predicting the Molecular Targets of Conopeptides by using Principal Component Analysis and Multiclass Logistic Regression
Xavier Eugenio Asuncion, Abdul-Rashid Sampaco III, Henry Adorna, Joselito Magadia, Vena Pearl Boñgolan, and Arturo Lluisma

Molecular Phylogeny of Philippine Tigerperches (Perciformes: Terapontidae) Based on Mitochondrial Genes
Reynand Jay C. Canoy, Ian Kendrich C. Fontanilla, and Jonas P. Quilang


Development of Microsatellites for the Philippine Eagle, Pithecophaga jefferyi, Using Next-generation Sequencing
Perry S. Ong, Vonette Joi B. Padilla, Marco Philip B. Serafica, Adrian U. Luczon, Dennis Joseph I. Salvador, Melizar V. Duya, Ian Kendrich C. Fontanilla, and Jonas P. Quilang

Genome-wide Profiling and Characterization of Terpene Synthase Linked Simple Sequence Repeats in Coffea canephora Pierre ex A. Froehner for Identification of Potential Markers for Aroma in Philippine-grown Coffee Varieties
Daisy May C. Santos, Angelo Joshua A. Victoria, Carla Francesca F. Besa, and Ernelea P. Cao

Development of High-resolution Melting Assays for the Detection of Single Nucleotide Polymorphisms in Iron-related Genes: The Food and Nutrition Research Institute's Nutritional Genomics Laboratory Experience
Vanessa Joy A. Timoteo, Jacus S. Nacis, Rod Erick L. Agarrado, Marietta P. Rodriguez, Leslie Michelle M. Dalmacio, and Mario V. Capanzana